Ruepp A, Graml W, Santos-Martinez ML, Koretke KK, Volker C, Mewes HW, Frishman D, Stocker S, Lupas AN, Baumeister W: The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum. Nature. 2000, 407: 508-513. 10.1038/35035069.
PubMed CAS Article Google Scholar
Darland G, Brock TD, Samsonoff W, Conti SF: A thermoacidophilic mycoplasma isolated from a coal refuse pile. Science. 1970, 170: 1416-1418.
PubMed CAS Article Google Scholar
Bult CJ, White O, Olsen GJ, Zhou L, Fleischmann RD, Sutton GG, Blake JA, FitzGerald LM, Clayton RA, Gocayne JD, et al: Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Science. 1996, 273: 1058-1073.
PubMed CAS Article Google Scholar
Smith DR, Doucette-Stamm LA, Deloughery C, Lee H, Dubois J, Aldredge T, Bashirzadeh R, Blakely D, Cook R, Gilbert K, et al: Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics. J Bacteriol. 1997, 179: 7135-7155.
PubMed CAS PubMed Central Google Scholar
Klenk HP, Clayton RA, Tomb JF, White O, Nelson KE, Ketchum KA, Dodson RJ, Gwinn M, Hickey EK, Peterson JD, et al: The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus. Nature. 1997, 390: 364-370. 10.1038/37052.
PubMed CAS Article Google Scholar
Deckert G, Warren PV, Gaasterland T, Young WG, Lenox AL, Graham DE, Overbeek R, Snead MA, Keller M, Aujay M, et al: The complete genome of the hyperthermophilic bacterium Aquifex aeolicus. Nature. 1998, 392: 353-358. 10.1038/32831.
PubMed CAS Article Google Scholar
Kawarabayasi Y, Sawada M, Horikawa H, Haikawa Y, Hino Y, Yamamoto S, Sekine M, Baba S, Kosugi H, Hosoyama A, et al: Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3. DNA Res. 1998, 5: 55-76.
PubMed CAS Article Google Scholar
Nelson KE, Clayton RA, Gill SR, Gwinn ML, Dodson RJ, Haft DH, Hickey EK, Peterson JD, Nelson WC, Ketchum KA, et al: Evidence for lateral gene transfer between Archaea and bacteria from the genome sequence of Thermotoga maritima. Nature. 1999, 399: 323-329. 10.1038/20601.
PubMed CAS Article Google Scholar
Kawarabayasi Y, Hino Y, Horikawa H, Yamazaki S, Haikawa Y, Jin-no K, Takahashi M, Sekine M, Baba S, Ankai A, et al: Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1. DNA Res. 1999, 6: 83-101.
PubMed CAS Article Google Scholar
Ng WV, Kennedy SP, Mahairas GG, Berquist B, Pana M, Shuklac HD, Lasky SR, Baligac NS, Thorsson V, Sbrogna J, et al: Genome sequence of Halobacterium species NRC-1. Proc Natl Acad Sci USA. 2000, 97: 12176-12181. 10.1073/pnas.190337797.
PubMed CAS PubMed Central Article Google Scholar
Pyrococcus abyssi home page at Genoscope. [//www.genoscope.cns.fr/Pab/]
TIGR Microbial Database: a listing of microbial genomes and chromosomes in progress. [//www.tigr.org/tdb/mdb/mdbinprogress.html]
Schleper C, Puhler G, Kuhlmorgen B, Zillig W: Life at extremely low pH. Nature. 1995, 375: 741-742. 10.1038/375741b0.
PubMed CAS Article Google Scholar
Golyshina OV, Pivovarova TA, Karavaiko GI, Kondrateva TF, Moore ER, Abraham WR, Lunsdorf H, Timmis KN, Yakimov MM, Golyshin PN: Ferroplasma acidiphilum gen. nov., sp. nov., an acidophilic, autotrophic, ferrous-iron-oxidizing, cell-wall-lacking, mesophilic member of the Ferroplasmaceae fam. nov., comprising a distinct lineage of the Archaea. Int J Syst Evol Microbiol. 2000, 50: 997-1006.
PubMed CAS Article Google Scholar
DeLong EF: Archaea in coastal marine environments. Proc Natl Acad Sci USA. 1992, 89: 5685-5689.
PubMed CAS PubMed Central Article Google Scholar
Fraser CM, Gocayne JD, White O, Adams MD, Clayton RA, Fleischmann RD, Bult CJ, Kerlavage AR, Sutton G, Kelley JM, et al: The minimal gene complement of Mycoplasma genitalium. Science. 1995, 270: 397-403.
PubMed CAS Article Google Scholar
Sogin ML: Early evolution and the origin of eukaryotes. Curr Opin Genet Dev. 1991, 1: 457-463.
PubMed CAS Article Google Scholar
Margulis L: Archaeal-eubacterial mergers in the origin of Eukarya: phylogenetic classification of life. Proc Natl Acad Sci USA. 1996, 93: 1071-1076. 10.1073/pnas.93.3.1071.
PubMed CAS PubMed Central Article Google Scholar
Margulis L, Dolan MF, Guerrero R: The chimeric eukaryote: origin of the nucleus from the karyomastigont in amitochondriate protists. Proc Natl Acad Sci USA. 2000, 97: 6954-6959. 10.1073/pnas.97.13.6954.
PubMed CAS PubMed Central Article Google Scholar
Page 2
[base pairs] | ||||
Methanococcus jannaschii | AE | 1,644,970 | H | [3] |
Methanobacterium | AE | 1,751,377 | T | [4] |
thermoautotrophicum | ||||
Archaeoglobus fulgidus | AE | 2,178,400 | H | [5] |
Aquifex aeolicus | B | 1,551,335 | H | [6] |
Pyrococcus horikoshii | AE | 1,738,505 | H | [7] |
Thermotoga maritima | B | 1,860,725 | H | [8] |
Aeropyrum pernix | AC | 1,699,695 | H | [9] |
Thermoplasma acidophilum | AE | 1,564,905 | T | [1] |
Halobacterium strain | AE | 2,014,239 | EH | [10] |
NRC-1 | ||||
Pyrococcus abyssii | AE | 1,765,505 | H | [11] |
- *Domains: A, Archaea; E, Euryarchaeota; C, Crenarchaeota; B, Bacteria. †Phenotypes: H, hyperthermophile [growth optima > 80°C]; T, thermophile [growth optima > 40°C]; EH, extreme halophile [absolute growth requirement for NaCl > 2 M NaCl].